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but I think the height of the dishwasher under the cabinates would be an issue.
It depends on the cabinets. Most of the remodels I work on have the cabinets custom built. The cabinet maker takes into consideration the finished floor. Even if they were factory stock cabinets, 3/4" plywood could be installed where the cabinets sit to accomadate 3/4" flooring. This is all part of proper kitchen design and planning. As a hardwood flooring installer, it is EASIER for me to lay the floor before the cabinets are installed but NONE of my contractors will do this. There's more to the story than meets the eye. Oftentimes, if the cabs are custom made, the contractor gets a BIG payment once they're installed but he gets nothing having them sitting in the garage or some wharehouse. The sooner he gets them in, the sooner he can get the counters measured. The fabrication for the tops is normally two weeks from measure to install, during that time, the general wants the floors laid because nothing else can be done till the tops are down. It's often about keeping things moving along and work being done on the project. One can certainly lay an unfinished floor first, then install the cabinets and then wait two weeks for the counters to be installed with NO work being done but customers and contractors hate that. Better to immediately install the cabs, measure the tops, lay the floor, then install the tops with no downtime. Once the tops are installed, then sinks, plumbing and electrical hookups can proceed along with appliances. It just gets the project done quicker is all. And for PREFINISHED floors, they most definitely should be done at near the very last or they will get trashed. Anyway, this is the thinking behind installing wood floors after the cabinets. One other issue to consider: REPAIRS. Ever try to remove cupped and buckled T&G wood flooring from UNDER an installed cabinet. Not very easy. Many insurance water damage claims are from leaks in the kitchen. If the floors were under the cabinets, in some instances, they could have to remove their cabinets to remove the water-damaged flooring!

That is unacceptable for repairs.
Why is it unacceptable? If it's water damage don't you think there might be a moisture problem under the cabinets as well? You can't settle up with the insurance company after the fact...I would say it's unacceptable to repair the damage without pulling the cabinets